To install the ProteoWizard tools, download the binary package for your platform, and unzip it into the directory of your choice.
For convenience, adjust your "PATH" environment variable to include your ProteoWizard tools directory, so that the command line tools may be run from any directory.
ProteoWizard supports the reading/writing of the following open formats on all platforms:
ProteoWizard depends on vendor-supplied software libraries to access data in proprietary formats.
You can check to see whether the required components are installed:
Accessing certain vendor-format data files requires a separate download/install, as indicated in the table below.
Vendor | Formats | Vendor Required Software | Required Runtime Libraries | License |
---|---|---|---|---|
Agilent | MassHunter .d | distributed with ProteoWizard | none | Apache |
Applied Biosystems | WIFF | Protein Pilot 3 free trial | none | Protein Pilot |
Applied Biosystems | T2D | Data Explorer | none | Data Explorer |
Bruker | Compass .d, YEP, BAF, FID | distributed with ProteoWizard | MSVC 2005 SP1 x86 redistributable | NDA |
Thermo Fisher | RAW | distributed with ProteoWizard | none | MSFileReader |
Waters | MassLynx .raw | MassLynx | none | MassLynx |